PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1728
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 137aa    MW: 15107.9 Da    PI: 9.7734
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1728genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.65.4e-1691122132
                           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 
                                    C  Cgtt+T+ WRrgp+g ktLCnaCGl+y +
  evm.model.AsparagusV1_04.1728  91 CLECGTTNTTEWRRGPRGMKTLCNACGLRYWS 122
                                    889**************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MQRERSLRDN YAGLRSKGQK RKSTATDDSI AVERPHENEP GFFNTELDLS LSLGPPKAHT  60
NIAQSTVDPG NNDVRAQAQN PAPRAPAVRI CLECGTTNTT EWRRGPRGMK TLCNACGLRY  120
WSQEKLVSTL FSSKHP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-10GATA family protein