PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1729
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 145aa    MW: 15529.4 Da    PI: 8.6579
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1729genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA47.72.2e-1599130132
                           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32 
                                    C  Cgtt+T+ WRrgp g ktLCnaCGl+y +
  evm.model.AsparagusV1_04.1729  99 CLECGTTNTTVWRRGPKGMKTLCNACGLRYWS 130
                                    889**************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MLLALMDSAN NMGSSSSPPS DLRYKGQKRK STATDDSVAV DRPHENEPGS SNTELDLSLS  60
LGPPKAHTNI AQNPAEPGNN DVPAQVQNPT PRAPAIRICL ECGTTNTTVW RRGPKGMKTL  120
CNACGLRYWS QEKLVSTLFS SKHP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18380.14e-12GATA family protein