PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1797
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 148aa    MW: 16338.7 Da    PI: 10.4344
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1797genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.7e-192777255
                            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                   +y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae+Aa a+++a+ + +g
  evm.model.AsparagusV1_04.1797 27 CYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDSAEDAALAYDQAAFSTRG 77
                                   8********.**********44465..**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MHRTQTTPAG CKSDVSRSQH NKKKDKCYRG VRRRPWGKYA AEIRDSTRNG VRVWLGTFDS  60
AEDAALAYDQ AAFSTRGATA VMNFPLEEVR ESLRGLGYCK MEDDGSPVIG LKKRYSMKRK  120
AVGVRKGKGI EKREVKVECS GVGGFGC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31230.17e-36ERF family protein