PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1859
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 155aa    MW: 17644.4 Da    PI: 10.0123
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1859genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.92.2e-1049914990
                           FAR1 49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90
                                   + +r++r etrt+C a + +k+ +  gk+ ++++++eHnH+l 
  evm.model.AsparagusV1_04.1859 49 DLTRNPRGETRTNCGAIMGIKLVRrIGKYSIYHFSEEHNHPLI 91
                                   457999****************9989***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MHMTFITNMH VVKALALEEL LMLQINKVYS LQEHLFVVRK VCGRRIRDDL TRNPRGETRT  60
NCGAIMGIKL VRRIGKYSIY HFSEEHNHPL ISQESVHFMP SHRKITSSDE AFLDLTANSG  120
LSPKSAFELM GQQVGGRESL GFTKVDQKNY LRTV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-18FAR1 family protein