PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.186
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 112aa    MW: 12307.3 Da    PI: 7.1608
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.186genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.51.7e-2466111752
                       G2-like   7 tpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                                   +peLHe  veav+qLGGsekAtPk +l+lmkv++Lt++hvkSHLQk
  evm.model.AsparagusV1_04.186  66 NPELHELVVEAVNQLGGSEKATPKVVLKLMKVDSLTMYHVKSHLQK 111
                                   79*******************************************8 PP
2Myb_DNA-binding383.7e-1267111646
                                   HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS
               Myb_DNA-binding   6 teEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 
                                   +e++el v+av+qlGg    t+k + + m    +t +++ks++qk
  evm.model.AsparagusV1_04.186  67 PELHELVVEAVNQLGGSekaTPKVVLKLMKvDSLTMYHVKSHLQK 111
                                   8**************99**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MQLMEFTLFF FPCEIVYSAA PMSSKVSVHQ PQTHQMVPSH FGELGAVSSP STSAGDAPAR  60
PWMWLNPELH ELVVEAVNQL GGSEKATPKV VLKLMKVDSL TMYHVKSHLQ K*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.14e-22G2-like family protein