PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1921
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ZF-HD
Protein Properties Length: 118aa    MW: 12789.1 Da    PI: 8.5191
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1921genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer47.54.1e-151162357
                    ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
                                   ++ Y  ClkN+   +  h vDGC  f+++   +  ++ l+C  C CHR+FH r+ 
  evm.model.AsparagusV1_04.1921 11 NIIYGVCLKNQTMGTAHHQVDGCLRFVED---QERPHLLRCRNCACHRSFHWRQI 62
                                   578************************98...3369***************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MELEMEETII NIIYGVCLKN QTMGTAHHQV DGCLRFVEDQ ERPHLLRCRN CACHRSFHWR  60
QIYVGHGRGH GGGRGVEAGR GQGRGRGRGR GRGRGRGNGG GGDDDDASST SSTITNE*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18089RGQGRGRGRG
28493RGQGRGRGRG
38494RGRGRGRGRGR
48695RGQGRGRGRG
58696RGRGRGRGRGR
68897RGQGRGRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28917.12e-08ZF-HD family protein