PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2096
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 243aa    MW: 27407 Da    PI: 8.4914
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2096genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.41.4e-171461148
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                                   +g+WT+eEde+l  +++q+G g+W++ ++  g+ R++k+c++rw +yl
  evm.model.AsparagusV1_04.2096 14 KGAWTKEEDERLSAYIRQHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61
                                   79******************************99************97 PP
2Myb_DNA-binding59.38.7e-1967110146
                                    TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                    rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w++
  evm.model.AsparagusV1_04.2096  67 RGNFTEEEDELIIKLHSLLGNK-WSSIAGELP-GRTDNEIKNYWNT 110
                                    89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MGRSPCCEKA HTNKGAWTKE EDERLSAYIR QHGEGCWRSL PKAAGLLRCG KSCRLRWINY  60
LRPDLKRGNF TEEEDELIIK LHSLLGNKWS SIAGELPGRT DNEIKNYWNT RIKRKLLSQG  120
IDPASHRPLR APVSDVTISF TKNREDKQNL DFISQEKERS SNSSRSSSNS NDSTPTQCLD  180
LNLELCISPP AVEQTEGVSV KREVFCFDCR LGLRESNGCI KCEGFFGLSS AGVLDFRSFQ  240
MK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-92MYB family protein