PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2406
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 225aa    MW: 25479.6 Da    PI: 4.4296
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2406genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM45.13.2e-141155348
                            NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                                   pGfrFhPt+eel+++yL++ v gkkl + ++i ++++y+++Pw+Lp
  evm.model.AsparagusV1_04.2406 11 PGFRFHPTEEELLNFYLRRMVLGKKLGF-DIIGTINLYRFDPWELP 55
                                   9************************999.99**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDKSGSELDL PGFRFHPTEE ELLNFYLRRM VLGKKLGFDI IGTINLYRFD PWELPGRAPR  60
GSKTDWVMNE YSLPDNSSSI PPPKEDIVLC KIYRKATSLK ELEQRAAMEE DARAALLLGI  120
SSTACTTDTV SSSEFDCNFQ NSHTSFDVDG NNNDELTLVK EEEEIKRGAE TSSSTINSSL  180
VARSVYLPEL QVPRTGMEWQ DTFLTQLRSP WLEQWSPLAN WLNF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.15e-29NAC family protein