PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.2423

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 242aa MW: 27500 Da PI: 5.2551

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.2423	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	2e-07	191	223	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+++++++L +++gL+ +q+ +WF N+R + evm.model.AsparagusV1_04.2423 191 WPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 223 58*****************************87 PP
2	ELK	26.7	1.3e-09	144	165	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ evm.model.AsparagusV1_04.2423 144 ELKIELKQGFRSRIEDVREEIL 165 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MMQSDQGLGM EMAGGGGGEC SSSVMAAAEE EQQRDRRAAG EFPPPVAVAQ YLFVLCSFRE 60 QLQQHVRIHA VEAVMACREI EQSFQEITGA TLDEGTGATM SDDEDEFHPE IPLDMGFDGN 120 DMMGFGPLLP TESERSLMER VRQELKIELK QGFRSRIEDV REEILRKRRA GKLPGDTTSV 180 LKQWWLQHSK WPYPTEDDKA KLVEETGLQL KQINNWFINQ RKRNWHNNSQ SATTLKSKRK 240 R*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	241	RKRNWHNNSQSATTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-108	TALE family protein