PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2731
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C2H2
Protein Properties Length: 124aa    MW: 13675.1 Da    PI: 4.4643
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2731genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.000271733319
                                   ETTTTEEESSHHHHHHH CS
                        zf-C2H2  3 CpdCgksFsrksnLkrH 19
                                   C++Cgk F ++ ++  H
  evm.model.AsparagusV1_04.2731 17 CENCGKEFVSWKSFLEH 33
                                   **************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MYALRTNPNR LRSCRACENC GKEFVSWKSF LEHGKCSTDD DEPEDNDSSF LSLSDADDDF  60
DRGGCAGWTK GKRSRRATYN NKMVVCPSTE EEDLANCLML LSSARVDPVF ASVEPEESCA  120
SAK*