PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2734
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 163aa    MW: 18742.2 Da    PI: 9.1219
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2734genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR181.51.5e-251199190
                           FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkl 81
                                   +fYneYA++ GFs+r+++     +++  t+rtfvC keg r+ +k++ + +r++r et t+C a + +k+ k +gk+ v+++
  evm.model.AsparagusV1_04.2734 11 DFYNEYAHSEGFSIRRASYAAD-KQRVLTSRTFVCCKEGLRKADKRD-DLTRNPRRETMTSCGAIMGIKLVKrTGKYSVYRF 90
                                   6***************987776.7778*****************999.9*********************999********* PP

                           FAR1 82 eleHnHela 90
                                   ++eHnH+l 
  evm.model.AsparagusV1_04.2734 91 SEEHNHPLI 99
                                   *******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MEFDSEIVAY DFYNEYAHSE GFSIRRASYA ADKQRVLTSR TFVCCKEGLR KADKRDDLTR  60
NPRRETMTSC GAIMGIKLVK RTGKYSVYRF SEEHNHPLIN QEYVHFMPSH RKITSSDEAF  120
LDLTANSGLS PKSAFELMGE QACGRESIRF SKVDQKNYLR TK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-23FAR1 family protein