PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.2873

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

FAR1

Protein Properties

Length: 198aa MW: 22862.1 Da PI: 10.0865

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.2873	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67	4.9e-21	35	123	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +fYn+YA++ GFs+r+++ ++g t+r f C keg r+ +k++ + r++r etrt+ + +k+ + ++k+ ++ evm.model.AsparagusV1_04.2873 35 DFYNKYARSEGFSIRRTAYAAD-KQGVLTSRIFICCKEGLRKADKRD-NLMRNPRGETRTNYGVIMGIKLVRrTSKYSIY 112 6*************987766.8899*************999.9*****************999*** PP FAR1 80 kleleHnHela 90 ++++eHnH+l evm.model.AsparagusV1_04.2873 113 RFSKEHNHPLI 123 *******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MEEPMKENNN SLERSKEDLK PKFFMEFDSE IDAYDFYNKY ARSEGFSIRR TAYAADKQGV 60 LTSRIFICCK EGLRKADKRD NLMRNPRGET RTNYGVIMGI KLVRRTSKYS IYRFSKEHNH 120 PLISQESVHL MPSHRKITSS DEAFLDLTAN SSLSPKSAFE LMGQQVGGRE SLGFTKVDQK 180 NYLRAVRQKK NLEKLVI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-27	FAR1 family protein