PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.2928

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 192aa MW: 21993.3 Da PI: 4.7075

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.2928	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	102.2	6.8e-32	4	115	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk. 79 lppGf+F P+deelv ++L +k+ g++ ++i+++d+y+++Pw+L+ k+ ++ + wyfFs++++ nrat evm.model.AsparagusV1_04.2928 4 LPPGFQFFPSDEELVIHFLYRKALGHR----DIIPSLDLYTHDPWELDGKALQGGNYWYFFSQKAR--------NRATGp 71 79*********************99....67**********977778899**9977........555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 sg W + d++v+s ++e+vg+kkt++fy +g kt+Wvmhey+l evm.model.AsparagusV1_04.2928 72 SGCWDSEADDEPVTS-GRENVGVKKTFAFY----ADGIKTSWVMHEYHL 115 9**********.999*******....7999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 192 aa Download sequence
MTSLPPGFQF FPSDEELVIH FLYRKALGHR DIIPSLDLYT HDPWELDGKA LQGGNYWYFF 60 SQKARNRATG PSGCWDSEAD DEPVTSGREN VGVKKTFAFY ADGIKTSWVM HEYHLLQRVD 120 RDGSTSSNGR RSSRRKGNPR MGDNKWVICR VYDSSYDSDQ LRLYEEGMEL SCLDEAFLSL 180 DDDLDDISWP N*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	4e-41	NAC family protein