PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3157
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HB-other
Protein Properties Length: 164aa    MW: 19425.9 Da    PI: 8.2224
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3157genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox60.52.6e-193489257
                                   T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
                       Homeobox  2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57
                                    + ++ t+e+l++Le+++++n++ps eer+ L+++lgL   qVk+WFqNrR ++kk
  evm.model.AsparagusV1_04.3157 34 NPYRRRTPEELQQLEAFYNQNPHPSDEERTALSEQLGLGSLQVKFWFQNRRRQRKK 89
                                   5667789********************************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MEFQEARVQR DLAMEFQEAR DGIQINEKER NIRNPYRRRT PEELQQLEAF YNQNPHPSDE  60
ERTALSEQLG LGSLQVKFWF QNRRRQRKKE SETKLNETLR YENLELKIEN SRLKKKLSSV  120
ECYNCDMPFL EGTDADGAKL MVENALLKEK IKNMFPGVKH SHH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.18e-29HD-ZIP family protein