PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3173
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 194aa    MW: 22483.5 Da    PI: 8.4872
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3173genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.35.8e-32120178159
                                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    ldDgy+WrKYGqK+vk+s +prsY+rCt+++C+vkkkver +ed ++v++tYeg+H+h+
  evm.model.AsparagusV1_04.3173 120 LDDGYKWRKYGQKTVKNSLHPRSYFRCTHHNCRVKKKVERLSEDCRMVITTYEGRHTHT 178
                                    59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MFSGSMLIKI IFVSHLVDIS MEGGESRLAS HCYVLEIPPV SNLTNLQQEE SLQGLIQGPN  60
CNPNFKPWSN EELETSDPKD VSNSWWKRSS LGVEKGKMRM RRKMREPRFC FQTRSDVDVL  120
DDGYKWRKYG QKTVKNSLHP RSYFRCTHHN CRVKKKVERL SEDCRMVITT YEGRHTHTPD  180
DTNSSEPECF SSF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199105RMRRKMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44745.13e-54WRKY family protein