PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3243
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 142aa    MW: 15906 Da    PI: 9.4856
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3243genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.45e-2075125255
                            AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    +y+GVr+++ +g+++AeIrdp   g k +r++lg+f tae+Aa a+++a+ +++g
  evm.model.AsparagusV1_04.3243  75 HYRGVRRRP-WGKFAAEIRDP---GrKGARVWLGTFETAEDAAMAYDKAAYRMRG 125
                                    8********.**********9...8677*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MHLLDGSTAK KFRRSSSFNT LISDNWRENP FIANDPDDMV VFETLSYAFA HGWIPSDSGE  60
VKAESEPPPP PAEKHYRGVR RRPWGKFAAE IRDPGRKGAR VWLGTFETAE DAAMAYDKAA  120
YRMRGSRAML NFPLGFVVLV V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-30ERF family protein