PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3551
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 206aa    MW: 24515.8 Da    PI: 9.4972
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3551genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM182.21.3e-5671361129
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknra 77 
                                    +ppGfrFhPtdeelv++yL+kkv++ k++l +vik+vd+yk+ePwdL++  k+   e++ewyfFs++dkky+tg+r+nra
  evm.model.AsparagusV1_04.3551   7 VPPGFRFHPTDEELVDYYLRKKVASIKIDL-DVIKDVDLYKIEPWDLQEqcKIGVeEQNEWYFFSHKDKKYPTGTRTNRA 85 
                                    69****************************.9***************952433333556********************* PP

                            NAM  78 tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                    t++g+Wkatg+dk+++s k++lvg++ktLvfykgrap+g+k+dW+mheyrle
  evm.model.AsparagusV1_04.3551  86 TTAGFWKATGRDKPIYS-KNNLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136
                                    *****************.899*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MNTFSHVPPG FRFHPTDEEL VDYYLRKKVA SIKIDLDVIK DVDLYKIEPW DLQEQCKIGV  60
EEQNEWYFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI YSKNNLVGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN ATPQEEGWVV CRVFKKRVTA FKFHYYEHEK THMNPEIYSK  180
SESEREREAK FERNLKGVFD RSKLI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.18e-88NAC family protein