PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.405
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 261aa    MW: 28755.4 Da    PI: 10.0485
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.405genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.4e-164084147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  r rWT+eE+ ++++a +++G   W++I +++g ++t+ q++s+ qk+
  evm.model.AsparagusV1_04.405 40 RERWTEEEHHKFLEALRLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 84
                                  78******************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MESFSLETPS INGVQSEENH SSRDVFAPKV RKPYTITKQR ERWTEEEHHK FLEALRLYGR  60
AWRRIEEHVG TKTAVQIRSH AQKFFTKVVK ESTANGAGKV KPIEIPPPRP KRKPVHPYPR  120
KFGTSSNNGT LNIGKLGRSS SPILSGSEQG NGSPTSVLSA FGSDTMSSFL SSLPNSCTSP  180
VTSAAGSNEQ ETSIEEEKQN HSPMVNLLTF LXXXXRPSLW RPCFIKGSFI KGCTSSLPQA  240
IWENCSGGGF TKSVAFQHCE *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.12e-46MYB_related family protein