PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.581
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 552aa    MW: 62496.8 Da    PI: 5.9834
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.581genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.68.9e-26194247155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v gLt+e+v+SHLQkYRl
  evm.model.AsparagusV1_04.581 194 KARVVWSVDLHQKFVNAVNQI-GFDKVGPKKILDLMNVRGLTRENVASHLQKYRL 247
                                   68*******************.9*******************************8 PP
2Myb_DNA-binding40.28e-13196246148
                                   TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                   r  W+ ++++++v+av+q G +   +k+I   m+  g+t++++ s++qky+
  evm.model.AsparagusV1_04.581 196 RVVWSVDLHQKFVNAVNQIGFDkvGPKKILDLMNvRGLTRENVASHLQKYR 246
                                   678***********************************************7 PP
3Response_reg78.81.8e-26161241109
                                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS
                  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvta 79 
                                   vl+vdD+p+ +++l+++l+k  y +v+++  ++ al ll+e++  +D+++ D++mp+mdG++ll++   e  +lp+i+++ 
  evm.model.AsparagusV1_04.581  16 VLVVDDDPTWLKILEKMLRKCSY-DVTTCGLATVALSLLRERRekFDIVISDVNMPDMDGFKLLEQVGLEM-DLPVIMMSV 94 
                                   89*********************.***************888888**********************6644.8******** PP

                                   TTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                  Response_reg  80 hgeeedalealkaGakdflsKpfdpeelvk 109
                                    ge + + + ++ Ga d+l Kp+ ++el++
  evm.model.AsparagusV1_04.581  95 DGETSRVMKGVQHGACDYLLKPIRMKELRN 124
                                   ***************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MENPSRTEPF PVGLRVLVVD DDPTWLKILE KMLRKCSYDV TTCGLATVAL SLLRERREKF  60
DIVISDVNMP DMDGFKLLEQ VGLEMDLPVI MMSVDGETSR VMKGVQHGAC DYLLKPIRMK  120
ELRNIWQHVY RKKIHEVREI EGHDISEDML QFRNCSEDFD DRQSSGGADL SSVRKRKDLD  180
TSDQEVNDSA AVKKARVVWS VDLHQKFVNA VNQIGFDKVG PKKILDLMNV RGLTRENVAS  240
HLQKYRLYLS RLQKQHEGKN CGANMQSDFS PKAPQANFGL QNSTPVNQAN TAGGYVPVGI  300
HPTVPITQKF QAQNRTPVHV DNEKSTVALH IKDQKEAARP DISNSRKLNS TPLGGVLSFK  360
STATNVEYKP VEPSTSKHQN LTGGIPISQF MQYPKHDHEP YSLLEDYSHL PLSSQLHQTQ  420
REPTFTDYKS HNNKTIMPVT CTIDSVSVQV ERGIVNPQEV NRSGSWLPPI REPSMKTDTD  480
LISLPQDMPL CSLQNISCFE NVGLNSMDIF QYDDSMSLTE FQSNWYEGLE FNTDYLYEPL  540
EYPIIDDCLF A*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-117ARR-B family protein