PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.697
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 122aa    MW: 14026.3 Da    PI: 4.3748
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.697genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB42.41.7e-133712795
                         NF-YB 27 iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95
                                  + kda     e    fi ++++ a+d c++ +r+tin+dd+l a+ ++ f +++epl++ l+++r+ ++
  evm.model.AsparagusV1_04.697  3 VQKDALLAFAESTRIFIHYLSATANDICKESRRQTINADDVLKAIEEIEFPEFIEPLRASLEEFRKKNA 71
                                  567888888899999**************************************************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MSVQKDALLA FAESTRIFIH YLSATANDIC KESRRQTINA DDVLKAIEEI EFPEFIEPLR  60
ASLEEFRKKN ASKRSATNAK ARESRKKQRS DNEEPRENEE HAEEVAEEEE KEEGEEPDEN  120
E*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.12e-22NF-YB family protein