PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.938

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 237aa MW: 26074.4 Da PI: 8.3913

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.938	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	49.9	6.9e-16	11	40	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk++l+lm++kgLtl+h+kSHLQkYRl evm.model.AsparagusV1_04.938 11 EATPKSVLRLMGMKGLTLYHLKSHLQKYRL 40 7****************************8 PP
2	Myb_DNA-binding	28.6	3.4e-09	13	39	23	48
-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmg.kgRtlkqcksrwqkyl 48 t+k++ r mg kg+tl+++ks++qky+ evm.model.AsparagusV1_04.938 13 TPKSVLRLMGmKGLTLYHLKSHLQKYR 39 79************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MIAPKLCILA EATPKSVLRL MGMKGLTLYH LKSHLQKYRL GKQARKETGL LDANKNGSSS 60 GVNYSSATNS DVSRGNNGGE MPLAESLRYQ IEVQRKLQEQ LEVQKKLQMR IEAQGKYLQA 120 ILEKAQKSLS YDVNDTENIE ESRAQLTDFN LNLSGLMENV SNIVSEDNKK TESGKAKAHV 180 SGFRLYQEDT EDTADVKFPS GGGSQHLDLN MKGGGYDLFG GTLGSELDLR MQLQGR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G45580.1	3e-37	G2-like family protein