PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.970
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family BBR-BPC
Protein Properties Length: 173aa    MW: 19122.5 Da    PI: 10.4439
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.970genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind85.32.2e-2649169111232
                     GAGA_bind 111 lqqlsepqledsave.lreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskae 190
                                   +  ++ep+ e s++e     + +   p+++  +e+++k+k+ + + ak+  ++ka ++k+ ++ +  k+k  s  ++ k+e
  evm.model.AsparagusV1_04.970  49 SSIVNEPDNEASSMEfPWFPQRSFFSPTRDPSPEHTKKNKEIEAKPAKVRIATKALRPKEPKKPP-AKKKGTSI-STGKRE 127
                                   34444455555555422223445556777777777777777778888888888888888844334.33333333.689*** PP

                     GAGA_bind 191 kksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqS 232
                                   k+++d +++g + D s++P+PvC+CtG++rqCY+WG+GGWqS
  evm.model.AsparagusV1_04.970 128 KRNQDATIEGTTQDFSGVPAPVCTCTGVSRQCYRWGSGGWQS 169
                                   *****************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
MEGKGRFSAR KWVFSDQTNP SNLASSVPEG NAPGYQPSFL KMSAYTNRSS IVNEPDNEAS  60
SMEFPWFPQR SFFSPTRDPS PEHTKKNKEI EAKPAKVRIA TKALRPKEPK KPPAKKKGTS  120
ISTGKREKRN QDATIEGTTQ DFSGVPAPVC TCTGVSRQCY RWGSGGWQSY ML*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.31e-17BBR-BPC family protein