PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.980
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 726aa    MW: 78797.5 Da    PI: 7.1162
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.980genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR191.21.4e-2868158288
                          FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwev 78 
                                   fY++YA++vGF+vr+s+ ++s+r+++i++r  vCskeg+re++ ++     +k++r+ra+tr+gCka+++vkk  dg+w+v
  evm.model.AsparagusV1_04.980  68 FYSSYARHVGFRVRISRYTRSRRDNSIISRLIVCSKEGFRESRGSEgvfgGRKQHRQRAVTRVGCKAMIMVKKVADGRWVV 148
                                   9********************************************99*99999999************************* PP

                          FAR1  79 tkleleHnHe 88 
                                   +k+++eHnH 
  evm.model.AsparagusV1_04.980 149 SKFVKEHNHG 158
                                   *********5 PP
2FAR189.93.5e-28207299290
                          FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwev 78 
                                   fY +YA+++GF+ r+sk  +s+++++i++r+ vCskeg+re + kk    + +++r+r++tr+gCka++ vkk ++gkw+v
  evm.model.AsparagusV1_04.980 207 FYLNYARQMGFRARISKYCRSRKDNSIISRQIVCSKEGFRELRIKKeetnDGRAKRPRVVTRIGCKAMIIVKKLSTGKWVV 287
                                   9***************************************9998887777788899************************* PP

                          FAR1  79 tkleleHnHela 90 
                                   +++e+eHnH+la
  evm.model.AsparagusV1_04.980 288 SRFEKEHNHALA 299
                                   **********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 726 aa     Download sequence    
MDEVIIEPQI GNEEDESMMQ LDIEPFNGDS NNSNEVKGEL DLVASEGETN LEPYEGMEFE  60
SEEAARAFYS SYARHVGFRV RISRYTRSRR DNSIISRLIV CSKEGFRESR GSEGVFGGRK  120
QHRQRAVTRV GCKAMIMVKK VADGRWVVSK FVKEHNHGPV PPRKLEVRVV QKEEDSMEEL  180
NVLSDGGAVH EPVEGMEFDS EEDARTFYLN YARQMGFRAR ISKYCRSRKD NSIISRQIVC  240
SKEGFRELRI KKEETNDGRA KRPRVVTRIG CKAMIIVKKL STGKWVVSRF EKEHNHALAT  300
SKKEPWPLQA SNDCNEKGRV TYVVGEHMPS NVGMVMSGDC CNGSRSTSQE SLTVLYNQLC  360
YDAIRFAQEG AVSEEIYNVA TSALKEAVDK VAAAKRTAAA VANGVKGGHG SCMTKCSNEP  420
RKAGSGNEVL LMQQPVKFVL IPSTSLANDS KPANSPIMVN VPNSQGITVS NPTSLKQTLV  480
NAKSVKELVG NNSTNHMDAI QNSQNTEDTG ASQAQITPGN DSDFISSGVS ESKMVAFPAL  540
PVTFYMPVMG NLSESSSGNA GSNAYTLVAA PVNSSPVASG TQSRLNIQQS VAPSKDQNAR  600
SCTGPNPKVH ATAIAAGARI VPPQEAASLI KVIEAKVRSS RSSLGSGCKQ LGANVAPCKS  660
KEEGPRLLNP VQANVEAIEG KEQASSEEMR LQESGEGFKE MEAATMDHSA VYDSGEDHLF  720
SDAGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-38FAR1 family protein