PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.107
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 339aa    MW: 37714.6 Da    PI: 4.5664
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.107genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM25.44e-0810619057128
                           NAM  57 ewyfFskrdkkyat.gkrknr.atksgyWkatgkdkevlsk.......kgel..vglkktLvfy....kgrapkgektdWv 122
                                   ++   s++ ++y++ +kr nr + + g W      ++++++       +  +  +g    L+f       ++++ + t+Wv
  evm.model.AsparagusV1_05.107 106 DVLLHSETPREYSNsSKRFNRgVDEGGSWVGHAAGRPIYKTeqagdnkE--EieIGHGAQLAFKlfddPSDKKSKRGTTWV 184
                                   5566777888888747899**888899************9866665443..15689999999986665345555568**** PP

                           NAM 123 mheyrl 128
                                   mheyrl
  evm.model.AsparagusV1_05.107 185 MHEYRL 190
                                   ****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MYFYNMYRQE NGGGALLSIS SNLLEVDAVA AADVDDDLSF VQLLEEEMME VSSDGSRARR  60
FLPSEEDARR PHDTEAFRSG ARRLQAPAVA PPASPLPALR RGREGDVLLH SETPREYSNS  120
SKRFNRGVDE GGSWVGHAAG RPIYKTEQAG DNKEEIEIGH GAQLAFKLFD DPSDKKSKRG  180
TTWVMHEYRL VDDKADDVVL CRIHRRKGKG KEEEEERVAP VIDTQRRELM EVEAEQRRVK  240
RRRTGGGGGD DEEEEAHQAS AVDTDDGLIT MTLDEVNTTL DELPSNASRQ QSVDPVDVEQ  300
LSECLEVEPL AWFDGPSFRR DVSHSGLLEP AIAGFCCR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1236243QRRVKRRR