PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.1230
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 73aa    MW: 8269.31 Da    PI: 5.8387
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.1230genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.3e-11652347
                                   SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                                    WT    +++ +a + + ++   +W+ +ar +g g+t++++k ++q +
  evm.model.AsparagusV1_05.1230  6 QWTSKQNKIFEKALAVYDKDtpsRWENVARAVG-GKTAEEVKRHYQVL 52
                                   7********************************.************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 73 aa     Download sequence    
MASTSQWTSK QNKIFEKALA VYDKDTPSRW ENVARAVGGK TAEEVKRHYQ VLEEDIKQIE  60
SGLLCYSYIS IE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.19e-30MYB_related family protein