PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.1318
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 231aa    MW: 26410.4 Da    PI: 8.4652
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.1318genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.72.5e-3378135259
                                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+H+h+
  evm.model.AsparagusV1_05.1318  78 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPSIVITTYEGQHTHQ 135
                                    8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MNGDDGDDDD ASKMQLLKKI NIVGEPQQLK NDPDEVEGDN CGDKSNKVKK GAARKKGEKR  60
QREPRFAFMT KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCTV KKRVERSYQD  120
PSIVITTYEG QHTHQSPATV RGSSHLLAPP PLSSMHPSFH QEHHHLLMPH LHPQLININN  180
NNSNNYLQNL IQSISPFQQQ QQHLGQLPDH HYGLLQDIVP STFNDDNQLP *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.14e-50WRKY family protein