PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.141
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 494aa    MW: 55805 Da    PI: 5.9748
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.141genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.37e-28175228155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   k+r++Wt+eLH++Fv aveqL G ekA+Pk+ilelm+ + Lt+e+v+SHLQkYRl
  evm.model.AsparagusV1_05.141 175 KQRVVWTCELHQQFVAAVEQL-GVEKAVPKKILELMNNPTLTRENVASHLQKYRL 228
                                   79*******************.********************************8 PP
2Myb_DNA-binding40.94.8e-13177227148
                                   TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                   r  WT e+++++v av+qlG +   +k+I + m+  ++t++++ s++qky+
  evm.model.AsparagusV1_05.141 177 RVVWTCELHQQFVAAVEQLGVEkaVPKKILELMNnPTLTRENVASHLQKYR 227
                                   678***********************************************7 PP
3Response_reg69.81.1e-2341103109
                                   EESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTT CS
                  Response_reg   3 ivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahg 81 
                                   +vd +++  +++r +l++ +y +v++++ + +al++l++++  +Dl+l D+ mp+m+G++ll++i  e  +lp+i++++++
  evm.model.AsparagusV1_05.141   4 VVDVDRTCVHIIRAMLQRCRY-QVTTCSRAMDALDILRANKgkFDLVLSDVHMPDMNGFRLLEHIGLEM-DLPVIMMSSED 82 
                                   688899999************.***************888888**********************6654.8********** PP

                                   THHHHHHHHHTTESEEEESS--HHHHHH CS
                  Response_reg  82 eeedalealkaGakdflsKpfdpeelvk 109
                                   e +++l  +k Ga d+l Kp+ +++l +
  evm.model.AsparagusV1_05.141  83 EYDLVLMGVKHGACDYLIKPVRIDALKN 110
                                   ************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MSSVVDVDRT CVHIIRAMLQ RCRYQVTTCS RAMDALDILR ANKGKFDLVL SDVHMPDMNG  60
FRLLEHIGLE MDLPVIMMSS EDEYDLVLMG VKHGACDYLI KPVRIDALKN IWQHVVRKQR  120
NESKLKEVEY SGGSEDNDHH NKSFDENTST AIKRKREEEE EEKTEEREHM STTKKQRVVW  180
TCELHQQFVA AVEQLGVEKA VPKKILELMN NPTLTRENVA SHLQKYRLYL KRLKATQQQE  240
SGEAFFSNVP NSPLNQLPPQ ALMNLGQRRP INICFDQRGF FSPNPSFASS SNLSPMMMQQ  300
VNNNQILQTY GNLGFQATQG FASLPTNSFV KHSRQFSHDS MISNGISDHV LLRTGPTMNR  360
GQSFHGNYMN MQQYAAVPQA LYNVQGSIAP HASTGMIQES MTEAQGDFEV ATDIVNQDMI  420
SGNVGYGSIV SQDFNANLKE GAARSMRTFT KEIHIRAAYE EDGLLFDDDG LPDLISLWEN  480
KPGTDVLEPE VTY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.13e-84ARR-B family protein