PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.1628

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 517aa MW: 57785 Da PI: 4.4295

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.1628	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	99.2	5.8e-31	14	89	52	128
NAM 52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++k+wy+Fs+rd+ky++g+r+nratk+gyWkatgkd+++ + ++++vg kktLv+++grapkge+tdWvmhey++ evm.model.AsparagusV1_05.1628 14 RSRDKQWYYFSPRDRKYPNGSRSNRATKHGYWKATGKDRTISH-NSKAVGNKKTLVYHHGRAPKGERTDWVMHEYTI 89 56889***********************************9.999**************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MATSNNEKDK SLLRSRDKQW YYFSPRDRKY PNGSRSNRAT KHGYWKATGK DRTISHNSKA 60 VGNKKTLVYH HGRAPKGERT DWVMHEYTID EKVLERCSSV QDYFALYKLF RKSGPGPKNG 120 EQYGAPFREE EWEEDFPDDN FMNHINMGDQ SKEHPQFQSV DRVSNVVGER LPNYDVENML 180 LQMSDEQDVV PQHSECYSLN DDARVDNPGS GTDKCMQTTE HIQNHSVNRI VNEDTNTLSN 240 FHLEDILLQM SNELDVAPEA NITVNPLSYQ DDLFIQQTDA EYEHGSVMTS FQNTSAAANV 300 QPIEMPKMTS LTGSSVQGQD IADEEFLEIK DLNDLDSLNW GTEEISNNDH IPVSGGLIDT 360 DDYFDAQMFL AEATGPGHII NQNSWWDDFG GNGRHSQASH LTTEFWTEAQ SHNASTAVVP 420 SSASSGLAYA NDNQPDDGLT LGEMNNVGTP SESWFNSALL AFLDSVPSSP ALASENTLIS 480 RALERVSSFR TGQTQEAGGL PATKGFREMK SFAEDT*

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MATSNNEKDK SLLRSRDKQW YYFSPRDRKY PNGSRSNRAT KHGYWKATGK DRTISHNSKA  60
VGNKKTLVYH HGRAPKGERT DWVMHEYTID EKVLERCSSV QDYFALYKLF RKSGPGPKNG  120
EQYGAPFREE EWEEDFPDDN FMNHINMGDQ SKEHPQFQSV DRVSNVVGER LPNYDVENML  180
LQMSDEQDVV PQHSECYSLN DDARVDNPGS GTDKCMQTTE HIQNHSVNRI VNEDTNTLSN  240
FHLEDILLQM SNELDVAPEA NITVNPLSYQ DDLFIQQTDA EYEHGSVMTS FQNTSAAANV  300
QPIEMPKMTS LTGSSVQGQD IADEEFLEIK DLNDLDSLNW GTEEISNNDH IPVSGGLIDT  360
DDYFDAQMFL AEATGPGHII NQNSWWDDFG GNGRHSQASH LTTEFWTEAQ SHNASTAVVP  420
SSASSGLAYA NDNQPDDGLT LGEMNNVGTP SESWFNSALL AFLDSVPSSP ALASENTLIS  480
RALERVSSFR TGQTQEAGGL PATKGFREMK SFAEDT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-62	NAC family protein