PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.1736

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

HB-other

Protein Properties

Length: 1831aa MW: 205599 Da PI: 5.4914

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.1736	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.8	3.2e-17	40	95	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR +++qle+Le+ ++ + yps++ r+eL++k+gL++rq ++WF+ rR k++k evm.model.AsparagusV1_05.1736 40 PKRKMKSPYQLEVLEQTYAVETYPSEALRAELSAKIGLSDRQLQMWFCHRRLKDRK 95 689999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1831 aa Download sequence
MEVSAGGEEK PPREAWKKTP ESGGEISNAN NNGGSNGEKP KRKMKSPYQL EVLEQTYAVE 60 TYPSEALRAE LSAKIGLSDR QLQMWFCHRR LKDRKFPPAK RARKEEEPLP PQPVGPSADI 120 MMAGSGSPYL SSGEPRRGVG RAVSRVGPEM GIGKRYYEHS PMLAPPPMPP PQLSVGELRV 180 IASVEAQLGE PLREDGPILG VEFDPLPPGA FGAPIAVTPH QQPPMRPYNG KMFERHEAKA 240 IKTSTFLPTM DHCYVPGSSS GKRKASGGNA HVVHPQASSR ALHEYQFLPE QPSIRSEAYE 300 RMPQSHYYDS AVVTPNTRVS SLPVGGQYLH GNEHVAPTYT FQGQLPQQGR PQAFSSGQLE 360 YENAQQNHSF ANSPSDAQFG VHQGLGSENP YLSSDRRIFH DDDPTRLERK RKLEQSEEAR 420 IQKEVEAHEK RIRKELEKQD ILRRKREEQM RKEMERHDRE RRKEEERMLR EKQREEERIQ 480 REQRRELERR EKFLQKETRR AEKMRQKEEL RREKEAARLK AANDRATARR IAREYMELIE 540 DERLELMELA ASSKGLSSIV ALDGETLQQL DSFRDMLNAF PPKSVQLKHP FTTLPWARSD 600 ENVANFLMVW KFLVTFTDVL GLCTFTIDEF LQSLHDYDSK LLGEIHVALL KSIIKDIEDV 660 ARTPAMAYGY NQNSAANPGG GHPQIIEGAY AWGFDIRSWQ RHLNFLSWPE ILRQFAISAG 720 FGPQLKKRRV ELPYLHDDDE GNDGEDVIST LRNGAAAENA VALMHEKGYS HRRRSRHRLT 780 PGTVKFAAFH VLSLEGSKGL TILEVAEKIQ KSGLRDLTTS KTPEASIAAA LSRDTKLFER 840 TAPSTYCVRS PFRKDPADAD AILSAAREKI QVFQNGISDS EGEKDADDAD EAERDEDSEC 900 DGADDPEVDD TNTVENLSKD VHSSMQLKDS NTPAALENVK SEMLCDEVEA TPRSSLMNMA 960 KSSSAHPSGN FSLMCALDSP QPASTEPSCQ AITADVEDTV IDESNIGALW VLHLMEGDYS 1020 DLPVEERLNA LVALIDVAIE GNSMRVILEE RLEAASVLKK QMWADAQLDK RRFKEEYMSR 1080 VQYSSILGSK ADTSQMNVAE GSQTPPDIIN SKDIDGNPVL DGNDQFLDPQ CQNNVNNMSE 1140 RSSIGQDFST NPDALSVQQY GYVAEKSRSQ LKSYIGHKAE QHYEYRSLPL GQDRRRNRYW 1200 VFSTSASPNE IGAGRIFVES KDGLWRLIDT EEAFDALLAA LDTRGARESH LHSMMQRIEP 1260 AFKEAIRRNK KHASSVKLDG CVVKTETGAL DMTSSPNCQK GISSPSSILS SLSSDSAESL 1320 APFQIESGRN KMERNDILSR YKVFLRWMWK QYYSPSTLCA MKYGKSRCPE LLQVCHLCYN 1380 CHFTEERHCP SCHRTFKPMY NVDAKFSEHV SHCEDKQKMD PDWIYEVSDS LPSIGLQLLK 1440 AQLSLMEASI PAEALQSFWT DGYRKSWGVK LHSSTSAEDL LQLMTLLENA IKRDFLSPKF 1500 ETTNELLGSS TRGTVLASVP PSIAAVALRL LDLDASISYV MQQKLEFNKE KEAGDLIKLP 1560 SRFSAVKNMH ELEPNGSPEQ IDYQRDVRWL DPASGRTRGR GRGTRGRGGR GRGRGGRGVR 1620 GIGSSMRAEY KEDILGSYEK TTRKYTRRGG RTRGGWGRKR GRRSVRPRQR SDTRVTMAKE 1680 TQMGSFTNVG INIKQNSFEE SPRSSAGNEW GLEERTAYVE EEDNSSGSGS ENGLVSGDEY 1740 DDQAPNYVVG YGQNKPMGLL DDETDEDEDD VDGYEVEDDR SRLRQAMMDV DVDDEDEEEI 1800 GDDIRGGDGE DVGGDVNGDE DDYSSSEYSD *

Sequence ? help Back to Top

Protein Sequence Length: 1831 aa Download sequence

MEVSAGGEEK PPREAWKKTP ESGGEISNAN NNGGSNGEKP KRKMKSPYQL EVLEQTYAVE  60
TYPSEALRAE LSAKIGLSDR QLQMWFCHRR LKDRKFPPAK RARKEEEPLP PQPVGPSADI  120
MMAGSGSPYL SSGEPRRGVG RAVSRVGPEM GIGKRYYEHS PMLAPPPMPP PQLSVGELRV  180
IASVEAQLGE PLREDGPILG VEFDPLPPGA FGAPIAVTPH QQPPMRPYNG KMFERHEAKA  240
IKTSTFLPTM DHCYVPGSSS GKRKASGGNA HVVHPQASSR ALHEYQFLPE QPSIRSEAYE  300
RMPQSHYYDS AVVTPNTRVS SLPVGGQYLH GNEHVAPTYT FQGQLPQQGR PQAFSSGQLE  360
YENAQQNHSF ANSPSDAQFG VHQGLGSENP YLSSDRRIFH DDDPTRLERK RKLEQSEEAR  420
IQKEVEAHEK RIRKELEKQD ILRRKREEQM RKEMERHDRE RRKEEERMLR EKQREEERIQ  480
REQRRELERR EKFLQKETRR AEKMRQKEEL RREKEAARLK AANDRATARR IAREYMELIE  540
DERLELMELA ASSKGLSSIV ALDGETLQQL DSFRDMLNAF PPKSVQLKHP FTTLPWARSD  600
ENVANFLMVW KFLVTFTDVL GLCTFTIDEF LQSLHDYDSK LLGEIHVALL KSIIKDIEDV  660
ARTPAMAYGY NQNSAANPGG GHPQIIEGAY AWGFDIRSWQ RHLNFLSWPE ILRQFAISAG  720
FGPQLKKRRV ELPYLHDDDE GNDGEDVIST LRNGAAAENA VALMHEKGYS HRRRSRHRLT  780
PGTVKFAAFH VLSLEGSKGL TILEVAEKIQ KSGLRDLTTS KTPEASIAAA LSRDTKLFER  840
TAPSTYCVRS PFRKDPADAD AILSAAREKI QVFQNGISDS EGEKDADDAD EAERDEDSEC  900
DGADDPEVDD TNTVENLSKD VHSSMQLKDS NTPAALENVK SEMLCDEVEA TPRSSLMNMA  960
KSSSAHPSGN FSLMCALDSP QPASTEPSCQ AITADVEDTV IDESNIGALW VLHLMEGDYS  1020
DLPVEERLNA LVALIDVAIE GNSMRVILEE RLEAASVLKK QMWADAQLDK RRFKEEYMSR  1080
VQYSSILGSK ADTSQMNVAE GSQTPPDIIN SKDIDGNPVL DGNDQFLDPQ CQNNVNNMSE  1140
RSSIGQDFST NPDALSVQQY GYVAEKSRSQ LKSYIGHKAE QHYEYRSLPL GQDRRRNRYW  1200
VFSTSASPNE IGAGRIFVES KDGLWRLIDT EEAFDALLAA LDTRGARESH LHSMMQRIEP  1260
AFKEAIRRNK KHASSVKLDG CVVKTETGAL DMTSSPNCQK GISSPSSILS SLSSDSAESL  1320
APFQIESGRN KMERNDILSR YKVFLRWMWK QYYSPSTLCA MKYGKSRCPE LLQVCHLCYN  1380
CHFTEERHCP SCHRTFKPMY NVDAKFSEHV SHCEDKQKMD PDWIYEVSDS LPSIGLQLLK  1440
AQLSLMEASI PAEALQSFWT DGYRKSWGVK LHSSTSAEDL LQLMTLLENA IKRDFLSPKF  1500
ETTNELLGSS TRGTVLASVP PSIAAVALRL LDLDASISYV MQQKLEFNKE KEAGDLIKLP  1560
SRFSAVKNMH ELEPNGSPEQ IDYQRDVRWL DPASGRTRGR GRGTRGRGGR GRGRGGRGVR  1620
GIGSSMRAEY KEDILGSYEK TTRKYTRRGG RTRGGWGRKR GRRSVRPRQR SDTRVTMAKE  1680
TQMGSFTNVG INIKQNSFEE SPRSSAGNEW GLEERTAYVE EEDNSSGSGS ENGLVSGDEY  1740
DDQAPNYVVG YGQNKPMGLL DDETDEDEDD VDGYEVEDDR SRLRQAMMDV DVDDEDEEEI  1800
GDDIRGGDGE DVGGDVNGDE DDYSSSEYSD *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1605	1615	RGRGGRGRGRG
2	1607	1617	RGRGGRGRGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein