PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.183
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 199aa    MW: 22978.3 Da    PI: 11.2872
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.183genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.21.6e-1763106146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                                   rg+ T+eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
  evm.model.AsparagusV1_05.183  63 RGNITPEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 106
                                   7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MEGFDGMNVW PLEHGPQNMR RREKGLINLE DIVTWKRAEN GLKRTGKSCR LRWLNYLRPD  60
VRRGNITPEE QLLILELHSR WGNRWSKIAQ HLPGRTDNEI KNYWRTRVQK HAKQLKCDVN  120
SKQFKDVMRY LWMPRLHRKN SGGERLGRRA AEYQNLAPAW AVTGPRPRAG EAQLSPPSTV  180
TAGEDKGGGG VQLRPVRQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G48000.17e-60MYB family protein