PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2043
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 248aa    MW: 26674 Da    PI: 6.7914
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2043genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.92e-12555146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                                   +++WT eE+e l  +v ++G g W+tI +         +R+  ++k++w++
  evm.model.AsparagusV1_05.2043  5 KQKWTSEEEEALRAGVDKHGAGKWRTIQKDPEfshclATRSNIDLKDKWRN 55
                                   79************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MGAPKQKWTS EEEEALRAGV DKHGAGKWRT IQKDPEFSHC LATRSNIDLK DKWRNMSVSF  60
SGQGSREKSR TPKPKALPPV PVSSSGPPAL TLPKDDGVSV ALDVTGNSQD GKIPGYSALI  120
IEALTVLKEP NASEIEIGAI CSYIEGQKGY RLKDSTSATK TPTPKQKDPS QRSRVVQSSS  180
NSADSVGEAA DTIAYKIAES EAKSFLASEA VKEAERIASM HEEAQSLLKL TEEIYERCLR  240
GEVVTLA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.11e-43MYB_related family protein