PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.2150

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NF-YC

Protein Properties

Length: 171aa MW: 19378.9 Da PI: 5.5997

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.2150	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	166.1	4.4e-52	41	144	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkks 77 ql+ fw++q ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+k+ evm.model.AsparagusV1_05.2150 41 QLQLFWADQyreIEQTTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKN 120 89***99999**************************************************************** PP NF-YC 78 diaaavtrtdifdflvdivprdel 101 diaaa+trtd+fdflvd+ r+e evm.model.AsparagusV1_05.2150 121 DIAAAITRTDVFDFLVDNCAREEG 144 ****************999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MDPQGHGTPP PMNPAVQYPA GTPYAAFQHL YQQQQQQQNQ QLQLFWADQY REIEQTTDFK 60 NHNLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRGWAHAE ENKRRTLQKN 120 DIAAAITRTD VFDFLVDNCA REEGKEDGIA RTAMGVPAGA DPMAYYYVPQ *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	114	120	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	1e-63	NF-YC family protein