PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2380
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 246aa    MW: 27501.2 Da    PI: 9.8058
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2380genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM106.63e-3327754128
                            NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++++ ++elvg+kktLvfykgrap+gekt+Wvmheyrl
  evm.model.AsparagusV1_05.2380   2 GEKEWYFFSLRDRKYPTGVRTNRATSAGYWKTTGKDKEIFNSqSSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRL 77 
                                    579*************************************9867788***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MGEKEWYFFS LRDRKYPTGV RTNRATSAGY WKTTGKDKEI FNSQSSELVG MKKTLVFYKG  60
RAPRGEKTNW VMHEYRLQSK PTFKANKDEW VVCRVFMKSS GAKKYPSNQA RAANPYTIDM  120
STAMMPSLLH SATDPYQFAL NRNHHLTPSE LAELARFAKG QPGFNLPIQP QLNYPSNFTL  180
SGLNLNLGAQ AQQQPVLRPM PLPMHQQQVV SEPNSSVLTD CVLAGDGGFG SAGACVDLES  240
YWTAY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.22e-60NAC family protein