PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.254
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family C3H
Protein Properties Length: 223aa    MW: 24899.5 Da    PI: 6.997
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.254genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.93e-071661801226
                                   TS--TTTTT-SS-SS CS
                       zf-CCCH  12 tGtCkyGdrCkFaHg 26 
                                   +G+Ck G+rC+F H+
  evm.model.AsparagusV1_05.254 166 MGFCKNGSRCRFLHD 180
                                   7*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MNNGGIKVDI LEELDFCSNN LLLGLTMSLG CSRECLKEKI LIETHNIKTP PRRASLAPLQ  60
RMNIVGSENS REKEASERSS WTLSIELAKA SKGEQLPDKI WMKQQLTQQL AIGDNDVTKV  120
LERMSERENF ADNDSIKRPL RKAPLVPPQC YFAISTSLMH DIHRVMGFCK NGSRCRFLHD  180
LNEDKLDAAA RFPYPPGQLA DVPVVAHEPE GGCDDGADAR RR*