PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2784
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 252aa    MW: 27747.5 Da    PI: 10.8066
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2784genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.72.7e-1392136347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                    +WT+eE+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
  evm.model.AsparagusV1_05.2784  92 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVVSRTPTQVASHAQKY 136
                                    7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MRSRHRVSTK SGRRGGEETF RRCCGGLEAM RLGKVRRLPR YLGEEVKEKE KEQSNGGQQS  60
QQYQSHGGFG ERRGFEGKAC SKAEQERRKG IPWTEEEHRL FLLGLDKFGK GDWRSISRNF  120
VVSRTPTQVA SHAQKYFIRL NSMNKDRRRS SIHDITMVNG GDVASPQGPI TGQSNGNPPA  180
LAASSSMKHP SQHPQHPPAM PGVGMYGPPM GHPVTGHMVS AVGTPVMLPP HGHPPYVMPV  240
AYPVPPSSMH Q*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.15e-43MYB family protein