PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2813
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 147aa    MW: 15791.7 Da    PI: 4.8585
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2813genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB179.33.5e-5624119297
                          NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyve 81 
                                    reqdrflPian++rim+k++P+n+ki+k+ake+vqecvsefisf+tseasdkcqrekrktingddllwa++tlGfe+y+e
  evm.model.AsparagusV1_05.2813  24 REQDRFLPIANIGRIMRKAIPENGKIAKEAKESVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMGTLGFEEYIE 103
                                    89****************************************************************************** PP

                          NF-YB  82 plkvylkkyrelegek 97 
                                    plk+yl+ yre+eg++
  evm.model.AsparagusV1_05.2813 104 PLKLYLQLYREMEGDS 119
                                    **************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MADLGGPSTP ESGHSGGGGV GGAREQDRFL PIANIGRIMR KAIPENGKIA KEAKESVQEC  60
VSEFISFITS EASDKCQREK RKTINGDDLL WAMGTLGFEE YIEPLKLYLQ LYREMEGDSK  120
GPRTADQLGK RDGAFNGDAG SSFNGM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.16e-61NF-YB family protein