PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2853
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GATA
Protein Properties Length: 117aa    MW: 12488.1 Da    PI: 10.5893
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2853genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA46.84.1e-154981133
                           GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33
                                   C+ Cg t T+ WR+gp+g+ktLCn CGl+y+k+
  evm.model.AsparagusV1_05.2853 49 CAMCGGTRTTKWRNGPQGPKTLCNKCGLRYQKN 81
                                   9******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MESSVSYVLE GKEVEVSSNH LQTADSANPQ KAPKQTRVDS ASSTSTNSCA MCGGTRTTKW  60
RNGPQGPKTL CNKCGLRYQK NQPPKSSDQQ KKISNGSSGK KKSKAPYKAL LIRATP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-11GATA family protein