PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.2876
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 249aa    MW: 27988.4 Da    PI: 7.4379
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.2876genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20117168256
                            AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                    +y+GVr+++ +g+++AeIrd  +   k  r++lg+f+taeeAa a+++a++k++g+
  evm.model.AsparagusV1_05.2876 117 QYRGVRRRP-WGKYAAEIRDtSR---KGVRVWLGTFDTAEEAALAYDKAALKMRGP 168
                                    69*******.**********331...34**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MAAQASQKLL ENVWANFIYD TKKSCNSSEE FNKIPAGSQT WQEPPNPEAD RNMEVLQRLP  60
SLGRWISMGA DCWEGLLDGL IDSTGLQTSS NLSTGSTVCS AAESKPPSKE KKVATRQYRG  120
VRRRPWGKYA AEIRDTSRKG VRVWLGTFDT AEEAALAYDK AALKMRGPRA HLNFSMDMVV  180
KALESNETNH DRRKRAKREW NTNDGNLIES PPRKRMASIA PDHSQEMEVV EFYDLGDDYL  240
ESFMSSFV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1192199RRKRAKRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.15e-28ERF family protein