PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.3360
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 652aa    MW: 71299.8 Da    PI: 5.9108
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.3360genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.43.3e-28208261155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    kpr++W+ +LH++Fv av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  evm.model.AsparagusV1_05.3360 208 KPRVVWSVDLHRKFVAAVNQL-GIDKAVPKRILDLMNVEKLTRENVASHLQKYRL 261
                                    79*******************.********************************8 PP
2Myb_DNA-binding36.31.3e-11210260148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r  W+ +++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
  evm.model.AsparagusV1_05.3360 210 RVVWSVDLHRKFVAAVNQLGIDkaVPKRILDLMNvEKLTRENVASHLQKYR 260
                                    678********************************99*************7 PP
3Response_reg76.59.9e-26191271109
                                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS
                   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvt 78 
                                    vl vdD+p+ +++l+++l + +y +v+++ ++ +ale+l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++
  evm.model.AsparagusV1_05.3360  19 VLAVDDDPTCLKVLESLLLRCQY-HVTTTNQAIKALEMLRENKdqFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLS 96 
                                    799********************.***************888889*******************87754.558******* PP

                                    STTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                   Response_reg  79 ahgeeedalealkaGakdflsKpfdpeelvk 109
                                    a+ge + + + +  Ga d+l Kp+ +eel +
  evm.model.AsparagusV1_05.3360  97 ANGETQAVMKGITHGACDYLLKPVRIEELKN 127
                                    ****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 652 aa     Download sequence    
MTVVERSGSR DRFPIGMRVL AVDDDPTCLK VLESLLLRCQ YHVTTTNQAI KALEMLRENK  60
DQFDLVISDV HMPDMDGFKL LELVGLEMDL PVIMLSANGE TQAVMKGITH GACDYLLKPV  120
RIEELKNIWQ HVIRRKKVDP RDNNNLDSGD DCDKNQLMNS EGGQGSLANG SSDQNRKLNR  180
KRKDQNEEDD DDSEDNLNEN EDSSTQKKPR VVWSVDLHRK FVAAVNQLGI DKAVPKRILD  240
LMNVEKLTRE NVASHLQKYR LYLKRLSAVA NQQANMVAAL RGRDTSYLPL GSLNGYPNFN  300
SLVESRPLPN RSSFQPNGAV PRMNSFNGFG LHGFSLNNTN NPINDVSKLQ CIGPIVQQPK  360
AMQESSNSLL GGFSGSGVAI GHSNSFTNSA AKIPHIPSPL SSDPFEIGIG DSSHSADLSR  420
CNESWQGAIP STSYSGNTFA TSLPFSHNDL SSGNIRENLS PIVSNLGSNA RDSMMQNDRL  480
ANVHNQAGTL VTATGVNGDA NLLNFRSVGN SSLKWEDPRR GHIQNPNQIY SSLSNTSSSG  540
IRITDQNKGN QNLGNGFSND KIDVPIISQA NFRAPMLPLD SKSDKTAVGG QLHYKDEPLF  600
EGMKLPGGFN SGGFGLDDLV TNAMIKPECD DFTFIDGDIG CNDLYSLGAC M*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-116ARR-B family protein