PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.3514
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 175aa    MW: 19388.8 Da    PI: 11.0775
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.3514genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY58.31.6e-1899156259
                                    --SS-EEEEEEE--TT-SS-.....EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   2 dDgynWrKYGqKevkgsefp.....rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                    +D y+WrKYGqK++kgs++p     r+YY+C+s  gCp++k+v           +tYegeH+h 
  evm.model.AsparagusV1_05.3514  99 NDNYSWRKYGQKPIKGSPHPspydsRAYYKCSSVrGCPARKQVXXXX------XVTYEGEHRHV 156
                                    7*****************98778889******988********9988......9*********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEALVLTSGA MQSSFASFFL RLADITNNPS AKFKSSSTPP IERANAVRAR PVQAHDRIPA  60
AARRRVNCSS PARFLLRKNR VRRSIRVPAI SSKIADIPND NYSWRKYGQK PIKGSPHPSP  120
YDSRAYYKCS SVRGCPARKQ VXXXXXVTYE GEHRHVQHVV AVDGGSNEAI VFES*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.22e-35WRKY family protein