PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_05.369

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

C2H2

Protein Properties

Length: 165aa MW: 18382.7 Da PI: 8.2286

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_05.369	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.8	0.00074	44	66	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H evm.model.AsparagusV1_05.369 44 FECKTCNRRFPSFQALGGHRASH 66 89**********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MKRYSNSLGE LENINMANVL MLLSQSNNDS KTSTTNRTDE RRLFECKTCN RRFPSFQALG 60 GHRASHKKPK LSVDDSNKDL SLASGNKPKA HECSICGLEF GIGQALGGHM RRHRRASEGF 120 RQAFVKKIMA NNEGKRVVLL DLNLPPSDDD DDDDDEMECK KPGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37430.1	2e-36	C2H2 family protein