PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.539
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family S1Fa-like
Protein Properties Length: 213aa    MW: 23956.8 Da    PI: 10.1991
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.539genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA126.67.4e-40146212570
                          S1FA   5 kvea.kGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70 
                                   k+ea kGlnPG+ivl+vv gl+l+fl+gny+lyvyaqk+lPP+kkkPvskkk+kre+lkqGv++PGe
  evm.model.AsparagusV1_05.539 146 KEEAaKGLNPGVIVLIVVVGLVLLFLLGNYALYVYAQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE 212
                                   44555*************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVGAGREGRR RRFMGLMKRG GCVPNEYLFG FLVRGLRRLG DEEGAKMVER DYEEWDVNGK  60
WGEVEEGEEE IGVVESRVSA SDRWRWVKIS SLFLKTRAEK RLLGSFALRD DDNALGSPVM  120
VDNGHLRISW NQYALDFNVN MGNIIKEEAA KGLNPGVIVL IVVVGLVLLF LLGNYALYVY  180
AQKTLPPKKK KPVSKKKMKR ERLKQGVSAP GE*