PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.65
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 218aa    MW: 24851.7 Da    PI: 8.5896
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.65genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.9e-1351103155
                                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                          HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                                  +r  hne Er RR+++Ns +++Lr llP+ +    skKls   +  ++ +YI +Lq
  evm.model.AsparagusV1_05.65  51 KRSIHNEYERDRRKKLNSLYSTLRNLLPEtD---ESKKLSIPCTIARVLKYIPELQ 103
                                  7999*************************77...*******************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MSSFSPNSSN FGWQLEDILI NELRSDELFA HYSPNDQDTS KTSITASNSM KRSIHNEYER  60
DRRKKLNSLY STLRNLLPET DESKKLSIPC TIARVLKYIP ELQKNIKRMA GKKEEILLSM  120
SKRQNFVIEP TISAKCLNKK EVIMQICIKN RSEMIPLSNI VKILEGEGLE LMNASTIANY  180
ADGIFYSLHL QAKDIIWMDG ESYCVHLINV LKEASKS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.13e-34bHLH family protein