PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.768
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 250aa    MW: 27869 Da    PI: 7.3425
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.768genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.34.4e-21130217183
                                   EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS
                            B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 
                                   f+k+lt sd++++g +++p++ ae++       + +++  ++l+ +d++ ++W++++iyr++++r++lt+GW+ Fv+ ++L
  evm.model.AsparagusV1_05.768 130 FCKTLTASDTSTHGGFSVPRRAAEKIfppldfsM-QPPA-QELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRL 208
                                   99*****************************954.4444.49*************************************** PP

                                   -TT-EEEEE CS
                            B3  75 kegDfvvFk 83 
                                    +gD+v+F 
  evm.model.AsparagusV1_05.768 209 FAGDSVLFI 217
                                   *******95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MKGGPVNGAV TAASPLEAER RTINQELWHA CAGPLVTLPP VGSLVVYFPQ GHSEQVAASM  60
QKNVDAQIPS YPNLPSKLIC LLHNVTLHAD AETDEVYAQM TLQPVNSYDE KALLASDLAL  120
KSNKPQTEFF CKTLTASDTS THGGFSVPRR AAEKIFPPLD FSMQPPAQEL QARDLHDNVW  180
TFRHIYRGQP KRHLLTTGWS LFVSGKRLFA GDSVLFIRYL IVLRAFIGKD DYLNTTHFIY  240
LYHEFIMIL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19220.11e-114ARF family protein