PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_05.86
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 226aa    MW: 25671.2 Da    PI: 9.7479
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_05.86genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.26.1e-18129219199
                                  EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS
                           B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 
                                  f+k +++s+++   +l lp++f+++h  +k+   t++l de+g + + ++  rkk+    l++GW++F   ++L +gD +vF
  evm.model.AsparagusV1_05.86 129 FIKPMLQSHTTGGFWLGLPNQFCSKHL-PKND-STIILIDEDGSKSDTTYLARKKG----LSAGWRGFSINHDLVDGDALVF 204
                                  89************************4.4434.49***************667776....9********************* PP

                                  EE-SSSEE..EEEEE-S CS
                           B3  83 kldgrsefelvvkvfrk 99 
                                  +l+++s+f  +v +fr+
  evm.model.AsparagusV1_05.86 205 QLINSSTF--KVYIFRA 219
                                  ***98888..9999996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MATEVQESYE ELRRKKLEEN KRKLDELKLH YISSSLREAS ASPKPSPVKR VKRQALEPSP  60
IKRRSDRIAN LPEPAYKEVI PDVVPRPRKM ISKHRDLSGR VYASDEARAY TIEKAEQLEA  120
ELGNEHPSFI KPMLQSHTTG GFWLGLPNQF CSKHLPKNDS TIILIDEDGS KSDTTYLARK  180
KGLSAGWRGF SINHDLVDGD ALVFQLINSS TFKVYIFRAR EYDSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-57B3 family protein