PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.114
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family FAR1
Protein Properties Length: 528aa    MW: 60279.6 Da    PI: 8.1753
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.114genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.94.7e-2584171190
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                                   +fY++YA+++GF +rks++ ++++n  it+rtfvC k+g++e++k+  +++  +r+e rtgC a+++++++ +g+++vt++
  evm.model.AsparagusV1_06.114  84 EFYRTYAENTGFFIRKSRQWTTSKNI-ITRRTFVCFKQGFKEKRKRV-KESLCPRPEIRTGCGACMTIRLTPNGRYKVTEF 162
                                   6********************97666.****************9998.99999**************************** PP

                          FAR1  82 eleHnHela 90 
                                   e+ HnH l 
  evm.model.AsparagusV1_06.114 163 ESSHNHMLE 171
                                   ******996 PP
2FAR175.79.3e-24213298190
                          FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkl 81 
                                   +fYn YA +vGF+vrk+k++    ++ +tkr fvCs++g++e++k+    +r  r++tr+gC a++ +k   +gk++v+ +
  evm.model.AsparagusV1_06.114 213 EFYNMYAGKVGFTVRKAKTTVG-PDNVVTKRVFVCSRQGFPENRKEC---KRVIRPHTRIGCPACMIIKIAPNGKYHVSVF 289
                                   6***************998776.7777****************9887...999**************************** PP

                          FAR1  82 eleHnHela 90 
                                   ++ HnH+la
  evm.model.AsparagusV1_06.114 290 VTRHNHQLA 298
                                   *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    
MTAITDSEII VSDHAGKGKE SDENKKNADS SSSSSIQRSS SRNASSKYDF VKETMAEVEH  60
MDVEKPGCSP RVDMFFDSEN EAYEFYRTYA ENTGFFIRKS RQWTTSKNII TRRTFVCFKQ  120
GFKEKRKRVK ESLCPRPEIR TGCGACMTIR LTPNGRYKVT EFESSHNHML ETLSRINIMK  180
LKRMKRKPCA IRADLVDETV NTPEFDTEEE AYEFYNMYAG KVGFTVRKAK TTVGPDNVVT  240
KRVFVCSRQG FPENRKECKR VIRPHTRIGC PACMIIKIAP NGKYHVSVFV TRHNHQLASP  300
ASEELIISDS AEADDTFITR AFTDNSSQGT DQPETDLVVA EAHIHMLPLK YSRKNSTCIW  360
IVYCTIAAHA AFEIFEKEFH LYMDCVLYNC GEVGTMSEYK VTTEEGVKDH FVKFDSSDLS  420
ASCTCKMFEF VGILCHHVLK VLDSRNIKDL PQQYILKRWR KDVKGGISGD RMELTEDDTR  480
SFRAQRYSHL CRVFSIAAAR ASKTIDSYTF LESQSHVLID QVEKILS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181188LKRMKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.13e-18FAR1 family protein