PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.1246

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

BES1

Protein Properties

Length: 365aa MW: 38549.8 Da PI: 8.421

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.1246	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	54.3	5.9e-17	50	156	49	149
DUF822 49 eVlkALcreAGwvved......DGt.tyrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfps 121 VlkAL eAGw+ve+ +G+ t r g+kp+e++e+ag s sasp+ss+q s+ +s+ +sp++s sp+ss++ evm.model.AsparagusV1_06.1246 50 RVLKALGDEAGWTVEPrryhlpEGNlTARYGCKPTESMEVAGPSISASPCSSYQPSPCASYNPSPASSALHSPASSHITN 129 6***********964444447876889*********************66666666666666666666666555 PP DUF822 122 pssldsislasaasllpvlsvlslvsss 149 p++ +s+ +a+sl+p+l++ls++sss evm.model.AsparagusV1_06.1246 130 PNN-PITSVPDANSLIPWLKNLSSASSS 156 554.44445555********997776 PP

Sequence ? help Back to Top
Protein Sequence Length: 365 aa Download sequence
MTSGRGCARA GRGRKQQEEG EKAAGDRGRR LRGAEDVREL TSSEALRQTR VLKALGDEAG 60 WTVEPRRYHL PEGNLTARYG CKPTESMEVA GPSISASPCS SYQPSPCASY NPSPASSALH 120 SPASSHITNP NNPITSVPDA NSLIPWLKNL SSASSSSSRP PFHNHNLYIH TGSISAPVTP 180 PLSSPTARSQ RIKTDWDDPT SQQPSWPPGN HYTFLPSSTP SSPRCQKMIP QPGWLSGPSS 240 PTFSLVSSNP FGSFKGGIMS EGSSRMWTPG QSGVCSPVMP RSGACSPVMP RSGVCSPAMR 300 GGPNRGDVHM LDCASDEFAF GSSSNGNIQG GGLVKAWEGE RIHEECGSDE LELTLGSSRT 360 RAGT*

Sequence ? help Back to Top

Protein Sequence Length: 365 aa Download sequence

MTSGRGCARA GRGRKQQEEG EKAAGDRGRR LRGAEDVREL TSSEALRQTR VLKALGDEAG  60
WTVEPRRYHL PEGNLTARYG CKPTESMEVA GPSISASPCS SYQPSPCASY NPSPASSALH  120
SPASSHITNP NNPITSVPDA NSLIPWLKNL SSASSSSSRP PFHNHNLYIH TGSISAPVTP  180
PLSSPTARSQ RIKTDWDDPT SQQPSWPPGN HYTFLPSSTP SSPRCQKMIP QPGWLSGPSS  240
PTFSLVSSNP FGSFKGGIMS EGSSRMWTPG QSGVCSPVMP RSGACSPVMP RSGVCSPAMR  300
GGPNRGDVHM LDCASDEFAF GSSSNGNIQG GGLVKAWEGE RIHEECGSDE LELTLGSSRT  360
RAGT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	4e-63	BES1 family protein