PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.1298
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 175aa    MW: 19900.1 Da    PI: 10.151
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.1298genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.45.4e-081264555
                                   HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHHH CS
                            HLH  5 hnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksLq 55
                                    + +Er+RR +++  +++L  llP+ + ++++++ +   + L   v+YIk +q
  evm.model.AsparagusV1_06.1298 12 RKVVERNRRIHLKRLYSQLYALLPQpPLATRGRRsVQVPDRLDASVNYIKFMQ 64
                                   5789*********************5559999999999************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
MEIGSSSVRP ERKVVERNRR IHLKRLYSQL YALLPQPPLA TRGRRSVQVP DRLDASVNYI  60
KFMQQRIESM KERKTHLLTQ LKSSQSAMKL PLHIEVHDLG IVLQVIIVSN SSDWFVFIKA  120
LRVVEDEGGE IVDANFSVAD DKAFHVINFK VGEPKSGQEA TSLLEKLKDI HLLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.13e-17bHLH family protein