PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_06.14
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 266aa    MW: 29433.1 Da    PI: 9.5673
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_06.14genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA106.52.1e-33160216158
                    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                  +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +ksrkpylheSRh hAl+R+Rg+gGrF
  evm.model.AsparagusV1_06.14 160 EEPVYVNAKQYHGILRRRQSRAKAESENKL-IKSRKPYLHESRHLHALKRARGCGGRF 216
                                  69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MRDIIIKKYI SFSNSISGRI SIIHSESVTK FCWRNSRFIL GARSFFYFQS AAEVFGVMTS  60
SVNDLSDSSG PNEQQKESQP VAQNQTPPNG SFQPGMPPSS LYMIPRGQVE EGHALAQTAY  120
PYIDPYYGSM IAAYGGQAVM HPHMIGVLQP GVPLPTDAVE EPVYVNAKQY HGILRRRQSR  180
AKAESENKLI KSRKPYLHES RHLHALKRAR GCGGRFLNSK KKGGDQQEDE AQTGNHLSLE  240
NLCRENPQSA HVAESNKKEN PSSGL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.24e-54NF-YA family protein