PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_06.1425

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 250aa MW: 26823.8 Da PI: 6.9497

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_06.1425	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	33.2	1e-10	130	151	2	23
--SS-EEEEEEE--TT-SS-EE CS WRKY 2 dDgynWrKYGqKevkgsefprs 23 +D ++WrKYGqK++kgs++pr evm.model.AsparagusV1_06.1425 130 SDNWAWRKYGQKPIKGSPYPRT 151 7********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MDPRDGDLWS AVRSFFQPKS PPPPPPPPRA DPFSHIFSPP PPPTMVRIDE NVSLMDFANA 60 SSFGGLEEVC MPFLSQIQQP PTAAGVVGPP TKASDQPKQK RQLGGRSGKK KKEPIKKVVV 120 HAPADTSNCS DNWAWRKYGQ KPIKGSPYPR TRNKQSGASS SSRHSPTTPL GTSPTSRSVG 180 EEDKDAAREF RVEEMEVGGV DDDFMFIGNA TAPFAASSLG ALDDFDDTDP FFSQLWNHNG 240 DGATGGGSK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29280.1	2e-09	WRKY family protein